Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-5A0A075B621 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6n-5A0A075B621 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
Trav6n-5A0A075B621 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6n-5A0A075B621 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6n-5A0A075B621 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6n-5A0A075B621 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6n-5A0A075B621 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Gm6576-201ENSMUST00000169678 883 ntBASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Gm44549-201ENSMUST00000208351 577 ntBASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-5A0A075B621 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Prob1-201ENSMUST00000097619 3021 ntBASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Gm7514-201ENSMUST00000209475 934 ntBASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trav6n-5A0A075B621 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-5A0A075B621 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms