Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Gm13474-201ENSMUST00000122466 815 ntBASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Gm2274-201ENSMUST00000184539 609 ntBASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Dancr-204ENSMUST00000132389 2347 ntBASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav1A0A075B5Z4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav1A0A075B5Z4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Gm37055-201ENSMUST00000191866 133 ntBASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav1A0A075B5Z4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.38■□□□□ 0.05
Trav1A0A075B5Z4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms