Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Gm15565-201ENSMUST00000118890 427 ntBASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Mir5130-201ENSMUST00000175160 84 ntBASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Mir1668-201ENSMUST00000184114 107 ntBASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Gm45058-201ENSMUST00000205810 766 ntBASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Trbv4A0A075B5I2 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Gm18959-201ENSMUST00000208954 655 ntBASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv4A0A075B5I2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv4A0A075B5I2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Gm18421-201ENSMUST00000204122 625 ntBASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trbv4A0A075B5I2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Gm11336-201ENSMUST00000118168 334 ntBASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms