Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 IGKV2-19-201ENST00000518132 283 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AF279873.1-201ENST00000523393 313 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 PMS2P3-207ENST00000529061 717 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC087276.1-201ENST00000529659 480 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 OR4A43P-201ENST00000532938 908 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLRN1P58418 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.04□□□□□ -1.6
CLRN1P58418 AC079600.1-201ENST00000550326 297 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.04□□□□□ -1.6
CLRN1P58418 AL133241.1-201ENST00000556832 487 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.04□□□□□ -1.6
CLRN1P58418 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.04□□□□□ -1.6
CLRN1P58418 AC025857.2-201ENST00000602711 238 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AL596327.1-201ENST00000603629 213 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC091488.1-201ENST00000604239 660 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC069304.2-201ENST00000605154 435 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC126118.1-201ENST00000607744 628 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AL354760.1-201ENST00000608357 643 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC026368.1-201ENST00000614934 690 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.04□□□□□ -1.6
CLRN1P58418 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CLRN1P58418 AC018816.2-201ENST00000621460 353 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 MUC2-202ENST00000613187 4845 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 BRAFP1-201ENST00000445336 2703 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC232271.1-201ENST00000602455 2715 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLRN1P58418 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.04□□□□□ -1.6
CLRN1P58418 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.04□□□□□ -1.6
CLRN1P58418 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLRN1P58418 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.03□□□□□ -1.6
CLRN1P58418 OR4F13P-202ENST00000560066 2054 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 PWAR1-201ENST00000624188 2414 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.03□□□□□ -1.6
CLRN1P58418 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CLRN1P58418 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 AC103591.2-201ENST00000265259 766 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.03□□□□□ -1.6
CLRN1P58418 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLRN1P58418 RNU6-348P-201ENST00000384386 107 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 AC005042.1-201ENST00000393397 800 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 RPS3AP2-201ENST00000407190 754 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 RNF10P1-201ENST00000418589 369 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.03□□□□□ -1.6
CLRN1P58418 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.03□□□□□ -1.6
CLRN1P58418 AC005033.1-201ENST00000428904 813 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 MTCO3P21-201ENST00000430791 643 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 MRPS10P2-201ENST00000431226 381 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 RPS17P15-201ENST00000475609 349 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 ATP5LP5-201ENST00000483050 299 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.03□□□□□ -1.6
CLRN1P58418 RN7SKP70-201ENST00000516655 271 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.03□□□□□ -1.6
CLRN1P58418 AC027309.2-201ENST00000520566 192 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 CCNG2P1-201ENST00000549521 1000 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 CR383656.6-201ENST00000550518 394 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.03□□□□□ -1.6
CLRN1P58418 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.03□□□□□ -1.6
CLRN1P58418 AC122134.1-201ENST00000565664 1104 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 AC234778.2-201ENST00000566241 354 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.03□□□□□ -1.6
CLRN1P58418 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.03□□□□□ -1.6
CLRN1P58418 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.03□□□□□ -1.6
CLRN1P58418 AC009237.13-201ENST00000603193 276 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 AL499605.1-201ENST00000604628 403 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 AC009237.12-201ENST00000604755 742 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 AL096712.1-201ENST00000614561 159 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.03□□□□□ -1.6
CLRN1P58418 AL356596.1-201ENST00000624230 379 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 AC005618.4-201ENST00000625053 554 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.03□□□□□ -1.6
CLRN1P58418 AC026634.1-201ENST00000634369 198 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 AC099654.12-201ENST00000639868 649 ntBASIC5.03□□□□□ -1.6
CLRN1P58418 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLRN1P58418 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.03□□□□□ -1.6
CLRN1P58418 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CLRN1P58418 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CLRN1P58418 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLRN1P58418 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLRN1P58418 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.03□□□□□ -1.6
CLRN1P58418 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms