Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Gm24589-201ENSMUST00000116692 94 ntBASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smarcb1Q9Z0H3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 Gm34391-201ENSMUST00000203706 907 ntBASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcb1Q9Z0H3 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.21■□□□□ 0.34
Smarcb1Q9Z0H3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smarcb1Q9Z0H3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.21■□□□□ 0.34
Smarcb1Q9Z0H3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smarcb1Q9Z0H3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcb1Q9Z0H3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Smarcb1Q9Z0H3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms