Protein–RNA interactions for Protein: Q9WU78

Pdcd6ip, Programmed cell death 6-interacting protein, mousemouse

Known RBP Predictions only

Length 869 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdcd6ipQ9WU78 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdcd6ipQ9WU78 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdcd6ipQ9WU78 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.31■□□□□ 0.68
Pdcd6ipQ9WU78 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdcd6ipQ9WU78 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pdcd6ipQ9WU78 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pdcd6ipQ9WU78 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Pdcd6ipQ9WU78 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdcd6ipQ9WU78 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pdcd6ipQ9WU78 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pdcd6ipQ9WU78 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Pdcd6ipQ9WU78 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdcd6ipQ9WU78 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pdcd6ipQ9WU78 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdcd6ipQ9WU78 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pdcd6ipQ9WU78 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdcd6ipQ9WU78 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdcd6ipQ9WU78 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.27■□□□□ 0.68
Pdcd6ipQ9WU78 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.27■□□□□ 0.68
Pdcd6ipQ9WU78 Gm34391-201ENSMUST00000203706 907 ntBASIC19.27■□□□□ 0.68
Pdcd6ipQ9WU78 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.27■□□□□ 0.68
Pdcd6ipQ9WU78 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pdcd6ipQ9WU78 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pdcd6ipQ9WU78 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pdcd6ipQ9WU78 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pdcd6ipQ9WU78 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdcd6ipQ9WU78 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdcd6ipQ9WU78 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdcd6ipQ9WU78 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Pdcd6ipQ9WU78 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdcd6ipQ9WU78 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.27■□□□□ 0.67
Pdcd6ipQ9WU78 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdcd6ipQ9WU78 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms