Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.89■□□□□ 0.29
Tubd1Q9R1K7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Gm6345-202ENSMUST00000180900 204 ntBASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.88■□□□□ 0.29
Tubd1Q9R1K7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Gm25016-201ENSMUST00000158399 131 ntBASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubd1Q9R1K7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tubd1Q9R1K7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.85■□□□□ 0.29
Tubd1Q9R1K7 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms