Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rhox4bQ9JI43 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rhox4bQ9JI43 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Gm13234-201ENSMUST00000120010 747 ntBASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Gm27454-201ENSMUST00000185090 204 ntBASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rhox4bQ9JI43 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rhox4bQ9JI43 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.46□□□□□ -0.25
Rhox4bQ9JI43 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rhox4bQ9JI43 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rhox4bQ9JI43 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rhox4bQ9JI43 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rhox4bQ9JI43 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms