Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk4Q9ERK0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk4Q9ERK0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk4Q9ERK0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ripk4Q9ERK0 Haglr-201ENSMUST00000100000 2085 ntBASIC20.23■□□□□ 0.83
Ripk4Q9ERK0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk4Q9ERK0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk4Q9ERK0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ripk4Q9ERK0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Gm11336-201ENSMUST00000118168 334 ntBASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Gm27000-201ENSMUST00000182943 842 ntBASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Gm7461-201ENSMUST00000058918 827 ntBASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ripk4Q9ERK0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk4Q9ERK0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk4Q9ERK0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk4Q9ERK0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Ripk4Q9ERK0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk4Q9ERK0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk4Q9ERK0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk4Q9ERK0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk4Q9ERK0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk4Q9ERK0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ripk4Q9ERK0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ripk4Q9ERK0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Olfr129-201ENSMUST00000122318 993 ntBASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ripk4Q9ERK0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ripk4Q9ERK0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ripk4Q9ERK0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ripk4Q9ERK0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms