Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Gm25857-201ENSMUST00000082788 129 ntBASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upf1Q9EPU0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Gm18889-201ENSMUST00000174284 929 ntBASIC18.86■□□□□ 0.61
Upf1Q9EPU0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Gm43125-201ENSMUST00000201724 730 ntBASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upf1Q9EPU0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.85■□□□□ 0.61
Upf1Q9EPU0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upf1Q9EPU0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.84■□□□□ 0.61
Upf1Q9EPU0 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.84■□□□□ 0.61
Upf1Q9EPU0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Upf1Q9EPU0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Upf1Q9EPU0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.83■□□□□ 0.61
Upf1Q9EPU0 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.83■□□□□ 0.61
Upf1Q9EPU0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Gm12151-201ENSMUST00000121374 290 ntBASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Gm37153-201ENSMUST00000193637 231 ntBASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upf1Q9EPU0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Upf1Q9EPU0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Upf1Q9EPU0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upf1Q9EPU0 Rprl2-201ENSMUST00000157150 290 ntBASIC18.82■□□□□ 0.6
Upf1Q9EPU0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.82■□□□□ 0.6
Upf1Q9EPU0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.82■□□□□ 0.6
Upf1Q9EPU0 Gm27301-201ENSMUST00000184012 127 ntBASIC18.82■□□□□ 0.6
Upf1Q9EPU0 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.82■□□□□ 0.6
Upf1Q9EPU0 Gm7774-201ENSMUST00000200064 533 ntBASIC18.82■□□□□ 0.6
Upf1Q9EPU0 Gm45747-201ENSMUST00000212203 999 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms