Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm27389-201ENSMUST00000183622 195 ntBASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Mir1668-201ENSMUST00000184114 107 ntBASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp2aQ9DB34 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Gm10013-201ENSMUST00000106074 672 ntBASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Gm21559-201ENSMUST00000220638 855 ntBASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Gm8587-201ENSMUST00000076538 843 ntBASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Actl10-202ENSMUST00000226583 1501 ntBASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp2aQ9DB34 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Gm26039-201ENSMUST00000158152 144 ntBASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp2aQ9DB34 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp2aQ9DB34 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp2aQ9DB34 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.33■□□□□ 0.37
Chmp2aQ9DB34 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp2aQ9DB34 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp2aQ9DB34 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp2aQ9DB34 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp2aQ9DB34 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp2aQ9DB34 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp2aQ9DB34 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Phf7-203ENSMUST00000226565 1971 ntBASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2aQ9DB34 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms