Protein–RNA interactions for Protein: Q9D9M9

Rnf138rt1, RIKEN cDNA 1700045I19, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138rt1Q9D9M9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf138rt1Q9D9M9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf138rt1Q9D9M9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rnf138rt1Q9D9M9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rnf138rt1Q9D9M9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rnf138rt1Q9D9M9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm15794-201ENSMUST00000120182 631 ntBASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm44430-201ENSMUST00000203376 995 ntBASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf138rt1Q9D9M9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf138rt1Q9D9M9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf138rt1Q9D9M9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm10052-201ENSMUST00000168019 960 ntBASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm27704-201ENSMUST00000185094 107 ntBASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm7729-201ENSMUST00000050143 801 ntBASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rnf138rt1Q9D9M9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms