Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.87■■□□□ 1.09
U2af1Q9D883 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.87■■□□□ 1.09
U2af1Q9D883 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
U2af1Q9D883 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
U2af1Q9D883 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1Q9D883 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1Q9D883 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
U2af1Q9D883 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1Q9D883 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1Q9D883 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1Q9D883 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1Q9D883 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1Q9D883 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1Q9D883 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1Q9D883 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1Q9D883 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
U2af1Q9D883 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1Q9D883 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
U2af1Q9D883 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1Q9D883 Gm27742-201ENSMUST00000184667 60 ntBASIC21.85■■□□□ 1.09
U2af1Q9D883 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1Q9D883 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.85■■□□□ 1.09
U2af1Q9D883 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1Q9D883 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1Q9D883 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1Q9D883 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
U2af1Q9D883 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
U2af1Q9D883 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
U2af1Q9D883 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.84■■□□□ 1.09
U2af1Q9D883 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
U2af1Q9D883 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
U2af1Q9D883 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
U2af1Q9D883 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
U2af1Q9D883 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
U2af1Q9D883 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
U2af1Q9D883 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
U2af1Q9D883 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
U2af1Q9D883 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
U2af1Q9D883 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21.84■■□□□ 1.09
U2af1Q9D883 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 Gm15794-201ENSMUST00000120182 631 ntBASIC21.83■■□□□ 1.09
U2af1Q9D883 Olfr129-201ENSMUST00000122318 993 ntBASIC21.83■■□□□ 1.09
U2af1Q9D883 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.83■■□□□ 1.09
U2af1Q9D883 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
U2af1Q9D883 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
U2af1Q9D883 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
U2af1Q9D883 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
U2af1Q9D883 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
U2af1Q9D883 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
U2af1Q9D883 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
U2af1Q9D883 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
U2af1Q9D883 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
U2af1Q9D883 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.82■■□□□ 1.08
U2af1Q9D883 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
U2af1Q9D883 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
U2af1Q9D883 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC21.82■■□□□ 1.08
U2af1Q9D883 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
U2af1Q9D883 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
U2af1Q9D883 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
U2af1Q9D883 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
U2af1Q9D883 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
U2af1Q9D883 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.81■■□□□ 1.08
U2af1Q9D883 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
U2af1Q9D883 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
U2af1Q9D883 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
U2af1Q9D883 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
U2af1Q9D883 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
U2af1Q9D883 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
U2af1Q9D883 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
U2af1Q9D883 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
U2af1Q9D883 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms