Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm7Q9CQQ8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm7Q9CQQ8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Gm27357-201ENSMUST00000183754 135 ntBASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm7Q9CQQ8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm7Q9CQQ8 Rarb-207ENSMUST00000225921 2756 ntBASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm7Q9CQQ8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm7Q9CQQ8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm7Q9CQQ8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm7Q9CQQ8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Lsm7Q9CQQ8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Lsm7Q9CQQ8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm7Q9CQQ8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms