Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim11Q99PQ2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim11Q99PQ2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trim11Q99PQ2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim11Q99PQ2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim11Q99PQ2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim11Q99PQ2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim11Q99PQ2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms