Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.49■□□□□ 0.23
Trim33Q99PP7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Gm45058-201ENSMUST00000205810 766 ntBASIC16.49■□□□□ 0.23
Trim33Q99PP7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim33Q99PP7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Gm13474-201ENSMUST00000122466 815 ntBASIC16.48■□□□□ 0.23
Trim33Q99PP7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim33Q99PP7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.47■□□□□ 0.23
Trim33Q99PP7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Trim33Q99PP7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Mir5130-201ENSMUST00000175160 84 ntBASIC16.47■□□□□ 0.23
Trim33Q99PP7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim33Q99PP7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim33Q99PP7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.46■□□□□ 0.23
Trim33Q99PP7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.46■□□□□ 0.23
Trim33Q99PP7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.46■□□□□ 0.23
Trim33Q99PP7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim33Q99PP7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.46■□□□□ 0.23
Trim33Q99PP7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim33Q99PP7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trim33Q99PP7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim33Q99PP7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trim33Q99PP7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim33Q99PP7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms