Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Tpgs1Q99MS8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpgs1Q99MS8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Gm36967-201ENSMUST00000193814 266 ntBASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tpgs1Q99MS8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.29■□□□□ 0.36
Tpgs1Q99MS8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Haglr-201ENSMUST00000100000 2085 ntBASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tpgs1Q99MS8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tpgs1Q99MS8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms