Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm44314-201ENSMUST00000199263 138 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44394-201ENSMUST00000199558 138 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44484-201ENSMUST00000199873 138 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44466-201ENSMUST00000200264 138 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm44359-201ENSMUST00000200671 138 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cstf1Q99LC2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Idnk-204ENSMUST00000226010 1898 ntBASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Gm15165-201ENSMUST00000118140 502 ntBASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cstf1Q99LC2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Mir8112-201ENSMUST00000184382 131 ntBASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cstf1Q99LC2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cstf1Q99LC2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Gm15467-201ENSMUST00000120582 445 ntBASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Gm7063-201ENSMUST00000186840 981 ntBASIC16.54■□□□□ 0.24
Cstf1Q99LC2 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cstf1Q99LC2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms