Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TrabdQ99JY4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Olfr129-201ENSMUST00000122318 993 ntBASIC17.29■□□□□ 0.36
TrabdQ99JY4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.29■□□□□ 0.36
TrabdQ99JY4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TrabdQ99JY4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Gm27741-201ENSMUST00000185060 237 ntBASIC17.28■□□□□ 0.36
TrabdQ99JY4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TrabdQ99JY4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TrabdQ99JY4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TrabdQ99JY4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TrabdQ99JY4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TrabdQ99JY4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TrabdQ99JY4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.27■□□□□ 0.36
TrabdQ99JY4 Gm10052-201ENSMUST00000168019 960 ntBASIC17.27■□□□□ 0.36
TrabdQ99JY4 Gm17971-201ENSMUST00000190239 806 ntBASIC17.27■□□□□ 0.36
TrabdQ99JY4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TrabdQ99JY4 Gm7729-201ENSMUST00000050143 801 ntBASIC17.27■□□□□ 0.36
TrabdQ99JY4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TrabdQ99JY4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TrabdQ99JY4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.27■□□□□ 0.35
TrabdQ99JY4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TrabdQ99JY4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
TrabdQ99JY4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TrabdQ99JY4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TrabdQ99JY4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TrabdQ99JY4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TrabdQ99JY4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TrabdQ99JY4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.26■□□□□ 0.35
TrabdQ99JY4 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.26■□□□□ 0.35
TrabdQ99JY4 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.26■□□□□ 0.35
TrabdQ99JY4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TrabdQ99JY4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TrabdQ99JY4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TrabdQ99JY4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TrabdQ99JY4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.26■□□□□ 0.35
TrabdQ99JY4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TrabdQ99JY4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TrabdQ99JY4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TrabdQ99JY4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TrabdQ99JY4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TrabdQ99JY4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.25■□□□□ 0.35
TrabdQ99JY4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.25■□□□□ 0.35
TrabdQ99JY4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TrabdQ99JY4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TrabdQ99JY4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TrabdQ99JY4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TrabdQ99JY4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms