Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.78■□□□□ 0.28
Smarcd2Q99JR8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Gm1401-201ENSMUST00000122048 772 ntBASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smarcd2Q99JR8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd2Q99JR8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.77■□□□□ 0.27
Smarcd2Q99JR8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd2Q99JR8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.77■□□□□ 0.27
Smarcd2Q99JR8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd2Q99JR8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd2Q99JR8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd2Q99JR8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Smarcd2Q99JR8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Gm25745-201ENSMUST00000174945 133 ntBASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd2Q99JR8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd2Q99JR8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms