Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp1aQ921W0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Chmp1aQ921W0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Gm10138-203ENSMUST00000206952 366 ntBASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Rab3c-203ENSMUST00000224180 967 ntBASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp1aQ921W0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp1aQ921W0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp1aQ921W0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.71□□□□□ -0.06
Chmp1aQ921W0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Chmp1aQ921W0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp1aQ921W0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp1aQ921W0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1aQ921W0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms