Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha11Q91Y19 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Gm18421-201ENSMUST00000204122 625 ntBASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha11Q91Y19 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdha11Q91Y19 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Gm27704-201ENSMUST00000185094 107 ntBASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Gm29707-201ENSMUST00000196325 491 ntBASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha11Q91Y19 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdha11Q91Y19 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Pcdha11Q91Y19 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdha11Q91Y19 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha11Q91Y19 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms