Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha2Q91Y17 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha2Q91Y17 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha2Q91Y17 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha2Q91Y17 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha2Q91Y17 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha2Q91Y17 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha2Q91Y17 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdha2Q91Y17 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha2Q91Y17 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdha2Q91Y17 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha2Q91Y17 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Gm15794-201ENSMUST00000120182 631 ntBASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Gm45328-201ENSMUST00000210942 917 ntBASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdha2Q91Y17 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdha2Q91Y17 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdha2Q91Y17 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha2Q91Y17 Haglr-201ENSMUST00000100000 2085 ntBASIC17.65■□□□□ 0.42
Pcdha2Q91Y17 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha2Q91Y17 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha2Q91Y17 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdha2Q91Y17 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha2Q91Y17 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdha2Q91Y17 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms