Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb20Q91XZ9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb20Q91XZ9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb20Q91XZ9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb20Q91XZ9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Gm11336-201ENSMUST00000118168 334 ntBASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb20Q91XZ9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 AC125539.1-202ENSMUST00000226449 670 ntBASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Phf7-203ENSMUST00000226565 1971 ntBASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb20Q91XZ9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Gm28923-201ENSMUST00000187755 322 ntBASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Gm21362-201ENSMUST00000194272 928 ntBASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Gm43974-201ENSMUST00000205080 684 ntBASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 CT009754.4-201ENSMUST00000221430 565 ntBASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb20Q91XZ9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Gm29518-201ENSMUST00000190858 372 ntBASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb20Q91XZ9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms