Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga3Q91XY5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Pcdhga3Q91XY5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga3Q91XY5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga3Q91XY5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga3Q91XY5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Pcdhga3Q91XY5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga3Q91XY5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Il3ra-202ENSMUST00000223589 738 ntBASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga3Q91XY5 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga3Q91XY5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga3Q91XY5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Gm27463-201ENSMUST00000183569 57 ntBASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga3Q91XY5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms