Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhga4Q91XY4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Gm22697-201ENSMUST00000175194 63 ntBASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Gm27389-201ENSMUST00000183622 195 ntBASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhga4Q91XY4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Gm18958-201ENSMUST00000174258 762 ntBASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga4Q91XY4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Haglr-201ENSMUST00000100000 2085 ntBASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga4Q91XY4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Gm6659-201ENSMUST00000174752 547 ntBASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga4Q91XY4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms