Protein–RNA interactions for Protein: Q91VB4

Hps3, Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

Predictions only

Length 1,002 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3Q91VB4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.78■□□□□ 0.6
Hps3Q91VB4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.78■□□□□ 0.6
Hps3Q91VB4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.78■□□□□ 0.6
Hps3Q91VB4 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.78■□□□□ 0.6
Hps3Q91VB4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hps3Q91VB4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hps3Q91VB4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hps3Q91VB4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Hps3Q91VB4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Phf7-203ENSMUST00000226565 1971 ntBASIC18.76■□□□□ 0.59
Hps3Q91VB4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.76■□□□□ 0.59
Hps3Q91VB4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hps3Q91VB4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.75■□□□□ 0.59
Hps3Q91VB4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Gm7370-201ENSMUST00000219471 767 ntBASIC18.75■□□□□ 0.59
Hps3Q91VB4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.75■□□□□ 0.59
Hps3Q91VB4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Gm5417-201ENSMUST00000079706 384 ntBASIC18.75■□□□□ 0.59
Hps3Q91VB4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Hps3Q91VB4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hps3Q91VB4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hps3Q91VB4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hps3Q91VB4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hps3Q91VB4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hps3Q91VB4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.74■□□□□ 0.59
Hps3Q91VB4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hps3Q91VB4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.74■□□□□ 0.59
Hps3Q91VB4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hps3Q91VB4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hps3Q91VB4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms