Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
StrcQ8VIM6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
StrcQ8VIM6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
StrcQ8VIM6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
StrcQ8VIM6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
StrcQ8VIM6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
StrcQ8VIM6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
StrcQ8VIM6 Mir6404-201ENSMUST00000183699 94 ntBASIC19.81■□□□□ 0.76
StrcQ8VIM6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.81■□□□□ 0.76
StrcQ8VIM6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
StrcQ8VIM6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
StrcQ8VIM6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
StrcQ8VIM6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
StrcQ8VIM6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.8■□□□□ 0.76
StrcQ8VIM6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
StrcQ8VIM6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.79■□□□□ 0.76
StrcQ8VIM6 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.79■□□□□ 0.76
StrcQ8VIM6 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.79■□□□□ 0.76
StrcQ8VIM6 Gm8396-201ENSMUST00000057361 823 ntBASIC19.79■□□□□ 0.76
StrcQ8VIM6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
StrcQ8VIM6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
StrcQ8VIM6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.79■□□□□ 0.76
StrcQ8VIM6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
StrcQ8VIM6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
StrcQ8VIM6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
StrcQ8VIM6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
StrcQ8VIM6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
StrcQ8VIM6 Gm8825-201ENSMUST00000182565 998 ntBASIC19.77■□□□□ 0.76
StrcQ8VIM6 Gm44872-201ENSMUST00000207864 420 ntBASIC19.77■□□□□ 0.76
StrcQ8VIM6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
StrcQ8VIM6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
StrcQ8VIM6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
StrcQ8VIM6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
StrcQ8VIM6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
StrcQ8VIM6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
StrcQ8VIM6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
StrcQ8VIM6 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.76■□□□□ 0.75
StrcQ8VIM6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
StrcQ8VIM6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
StrcQ8VIM6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
StrcQ8VIM6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
StrcQ8VIM6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
StrcQ8VIM6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
StrcQ8VIM6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
StrcQ8VIM6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.76■□□□□ 0.75
StrcQ8VIM6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
StrcQ8VIM6 Gm5186-201ENSMUST00000218781 920 ntBASIC19.76■□□□□ 0.75
StrcQ8VIM6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
StrcQ8VIM6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
StrcQ8VIM6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
StrcQ8VIM6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms