Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
H1fooQ8VIK3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Gm5417-201ENSMUST00000079706 384 ntBASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H1fooQ8VIK3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H1fooQ8VIK3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms