Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc65Q8VHI7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Mir6982-201ENSMUST00000184354 68 ntBASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc65Q8VHI7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc65Q8VHI7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Gm27000-201ENSMUST00000182943 842 ntBASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Gm2274-201ENSMUST00000184539 609 ntBASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc65Q8VHI7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Gm11539-201ENSMUST00000119837 557 ntBASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Gm13436-201ENSMUST00000120418 567 ntBASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc65Q8VHI7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms