Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.42■□□□□ 0.22
Slc6a20aQ8VDB9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Slc6a20aQ8VDB9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Gm10252-201ENSMUST00000209541 832 ntBASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc6a20aQ8VDB9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Slc6a20aQ8VDB9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Slc6a20aQ8VDB9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc6a20aQ8VDB9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms