Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Gm27463-201ENSMUST00000183569 57 ntBASIC16.65■□□□□ 0.26
Vps39Q8R5L3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps39Q8R5L3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vps39Q8R5L3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vps39Q8R5L3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps39Q8R5L3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Gm21814-202ENSMUST00000203277 873 ntBASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vps39Q8R5L3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps39Q8R5L3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps39Q8R5L3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms