Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh3kbp1Q8R550 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Gm17808-201ENSMUST00000200859 894 ntBASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh3kbp1Q8R550 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sh3kbp1Q8R550 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Sh3kbp1Q8R550 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sh3kbp1Q8R550 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sh3kbp1Q8R550 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Gm11355-201ENSMUST00000121120 306 ntBASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh3kbp1Q8R550 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Gm26039-201ENSMUST00000158152 144 ntBASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3kbp1Q8R550 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sh3kbp1Q8R550 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms