Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup35Q8R4R6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup35Q8R4R6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Gm24841-201ENSMUST00000158676 357 ntBASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Gm18025-201ENSMUST00000221733 862 ntBASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nup35Q8R4R6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Nup35Q8R4R6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nup35Q8R4R6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms