Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Atp2a1Q8R429 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atp2a1Q8R429 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atp2a1Q8R429 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.56■□□□□ 0.56
Atp2a1Q8R429 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Gm34391-201ENSMUST00000203706 907 ntBASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Gm18421-201ENSMUST00000204122 625 ntBASIC18.55■□□□□ 0.56
Atp2a1Q8R429 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Atp2a1Q8R429 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Birc2-201ENSMUST00000054878 378 ntBASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Atp2a1Q8R429 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Gm24589-201ENSMUST00000116692 94 ntBASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atp2a1Q8R429 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp2a1Q8R429 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp2a1Q8R429 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp2a1Q8R429 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atp2a1Q8R429 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.52■□□□□ 0.56
Atp2a1Q8R429 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.52■□□□□ 0.56
Atp2a1Q8R429 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.52■□□□□ 0.56
Atp2a1Q8R429 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms