Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfc3Q8R323 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rfc3Q8R323 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rfc3Q8R323 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.36■□□□□ 0.05
Rfc3Q8R323 Gm26039-201ENSMUST00000158152 144 ntBASIC15.36■□□□□ 0.05
Rfc3Q8R323 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rfc3Q8R323 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rfc3Q8R323 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.34■□□□□ 0.05
Rfc3Q8R323 Gm5587-201ENSMUST00000206270 674 ntBASIC15.34■□□□□ 0.05
Rfc3Q8R323 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.34■□□□□ 0.05
Rfc3Q8R323 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rfc3Q8R323 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rfc3Q8R323 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rfc3Q8R323 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Rfc3Q8R323 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rfc3Q8R323 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.33■□□□□ 0.04
Rfc3Q8R323 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc3Q8R323 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.33■□□□□ 0.04
Rfc3Q8R323 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Rfc3Q8R323 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfc3Q8R323 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms