Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Gm7153-201ENSMUST00000117092 455 ntBASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rftn2Q8CHX7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rftn2Q8CHX7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Gm15372-201ENSMUST00000120729 834 ntBASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rftn2Q8CHX7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rftn2Q8CHX7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Gm12895-201ENSMUST00000122214 226 ntBASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rftn2Q8CHX7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rftn2Q8CHX7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms