Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.84□□□□□ -0.03
ShfQ8CG80 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.84□□□□□ -0.03
ShfQ8CG80 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ShfQ8CG80 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.84□□□□□ -0.03
ShfQ8CG80 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.84□□□□□ -0.03
ShfQ8CG80 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.84□□□□□ -0.03
ShfQ8CG80 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShfQ8CG80 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ShfQ8CG80 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ShfQ8CG80 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ShfQ8CG80 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ShfQ8CG80 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ShfQ8CG80 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ShfQ8CG80 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ShfQ8CG80 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.83□□□□□ -0.04
ShfQ8CG80 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.83□□□□□ -0.04
ShfQ8CG80 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
ShfQ8CG80 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShfQ8CG80 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ShfQ8CG80 Mir1199-201ENSMUST00000117015 119 ntBASIC14.82□□□□□ -0.04
ShfQ8CG80 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.82□□□□□ -0.04
ShfQ8CG80 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.82□□□□□ -0.04
ShfQ8CG80 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ShfQ8CG80 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShfQ8CG80 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ShfQ8CG80 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ShfQ8CG80 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
ShfQ8CG80 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ShfQ8CG80 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.81□□□□□ -0.04
ShfQ8CG80 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ShfQ8CG80 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ShfQ8CG80 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ShfQ8CG80 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ShfQ8CG80 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms