Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Alx1Q8C8B0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Gm21362-201ENSMUST00000194272 928 ntBASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Alx1Q8C8B0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.39■□□□□ 0.7
Alx1Q8C8B0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Alx1Q8C8B0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Alx1Q8C8B0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alx1Q8C8B0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alx1Q8C8B0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alx1Q8C8B0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alx1Q8C8B0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Alx1Q8C8B0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Alx1Q8C8B0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alx1Q8C8B0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Alx1Q8C8B0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Alx1Q8C8B0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Gm10052-201ENSMUST00000168019 960 ntBASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Gm7729-201ENSMUST00000050143 801 ntBASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Alx1Q8C8B0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Gm14859-201ENSMUST00000117752 357 ntBASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Alx1Q8C8B0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Gm27357-201ENSMUST00000183754 135 ntBASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Gm7367-201ENSMUST00000057611 492 ntBASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alx1Q8C8B0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Haglr-201ENSMUST00000100000 2085 ntBASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alx1Q8C8B0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms