Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp44Q8C2S0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Mir770-201ENSMUST00000103252 94 ntBASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Gm6345-202ENSMUST00000180900 204 ntBASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.46■□□□□ 0.71
Usp44Q8C2S0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Gm23634-201ENSMUST00000175071 91 ntBASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp44Q8C2S0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp44Q8C2S0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp44Q8C2S0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp44Q8C2S0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms