Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rab11fip4Q8BQP8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab11fip4Q8BQP8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Gm7370-201ENSMUST00000219471 767 ntBASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Il3ra-202ENSMUST00000223589 738 ntBASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab11fip4Q8BQP8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Gm21559-201ENSMUST00000220638 855 ntBASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Gm8587-201ENSMUST00000076538 843 ntBASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab11fip4Q8BQP8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Gm27000-201ENSMUST00000182943 842 ntBASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rab11fip4Q8BQP8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rab11fip4Q8BQP8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms