Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Samm50Q8BGH2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Samm50Q8BGH2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Samm50Q8BGH2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Samm50Q8BGH2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Gm13559-201ENSMUST00000120476 863 ntBASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Samm50Q8BGH2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Samm50Q8BGH2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.49■□□□□ 0.71
Samm50Q8BGH2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Samm50Q8BGH2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Samm50Q8BGH2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Gm7638-201ENSMUST00000121348 967 ntBASIC19.47■□□□□ 0.71
Samm50Q8BGH2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms