Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trnp1Q80ZI1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.73■□□□□ 0.59
Trnp1Q80ZI1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Gm9172-201ENSMUST00000212092 954 ntBASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trnp1Q80ZI1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trnp1Q80ZI1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trnp1Q80ZI1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.71■□□□□ 0.59
Trnp1Q80ZI1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trnp1Q80ZI1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.71■□□□□ 0.59
Trnp1Q80ZI1 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.71■□□□□ 0.59
Trnp1Q80ZI1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trnp1Q80ZI1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trnp1Q80ZI1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Mir3113-201ENSMUST00000175478 76 ntBASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Mir8117-201ENSMUST00000184773 107 ntBASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trnp1Q80ZI1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Gm15920-201ENSMUST00000118998 402 ntBASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trnp1Q80ZI1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trnp1Q80ZI1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms