Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.84■□□□□ 0.13
Vrk1Q80X41 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Gm29707-201ENSMUST00000196325 491 ntBASIC15.84■□□□□ 0.13
Vrk1Q80X41 Gm44450-201ENSMUST00000199528 114 ntBASIC15.84■□□□□ 0.13
Vrk1Q80X41 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Vrk1Q80X41 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vrk1Q80X41 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vrk1Q80X41 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vrk1Q80X41 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vrk1Q80X41 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Vrk1Q80X41 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Vrk1Q80X41 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Gm13884-201ENSMUST00000118103 829 ntBASIC15.82■□□□□ 0.12
Vrk1Q80X41 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Gm8969-201ENSMUST00000199694 526 ntBASIC15.82■□□□□ 0.12
Vrk1Q80X41 Gm18421-201ENSMUST00000204122 625 ntBASIC15.82■□□□□ 0.12
Vrk1Q80X41 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vrk1Q80X41 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Gm15372-201ENSMUST00000120729 834 ntBASIC15.81■□□□□ 0.12
Vrk1Q80X41 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vrk1Q80X41 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.81■□□□□ 0.12
Vrk1Q80X41 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vrk1Q80X41 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms