Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Rab3gap1Q80UJ7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Gm34391-201ENSMUST00000203706 907 ntBASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Rab3gap1Q80UJ7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3gap1Q80UJ7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3gap1Q80UJ7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rab3gap1Q80UJ7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.15■□□□□ 0.82
Rab3gap1Q80UJ7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms