Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.16■□□□□ 0.5
Ush1gQ80T11 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ush1gQ80T11 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ush1gQ80T11 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ush1gQ80T11 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.15■□□□□ 0.5
Ush1gQ80T11 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ush1gQ80T11 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.15■□□□□ 0.5
Ush1gQ80T11 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.15■□□□□ 0.5
Ush1gQ80T11 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ush1gQ80T11 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ush1gQ80T11 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ush1gQ80T11 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ush1gQ80T11 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ush1gQ80T11 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ush1gQ80T11 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Ush1gQ80T11 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.14■□□□□ 0.49
Ush1gQ80T11 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Gm11336-201ENSMUST00000118168 334 ntBASIC18.14■□□□□ 0.49
Ush1gQ80T11 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Gm10052-201ENSMUST00000168019 960 ntBASIC18.14■□□□□ 0.49
Ush1gQ80T11 Gm18733-201ENSMUST00000173950 856 ntBASIC18.14■□□□□ 0.49
Ush1gQ80T11 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Gm7729-201ENSMUST00000050143 801 ntBASIC18.14■□□□□ 0.49
Ush1gQ80T11 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Ush1gQ80T11 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.13■□□□□ 0.49
Ush1gQ80T11 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ush1gQ80T11 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.12■□□□□ 0.49
Ush1gQ80T11 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ush1gQ80T11 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ush1gQ80T11 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ush1gQ80T11 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.11■□□□□ 0.49
Ush1gQ80T11 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.11■□□□□ 0.49
Ush1gQ80T11 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ush1gQ80T11 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ush1gQ80T11 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms