Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Pif1Q80SX8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.3■□□□□ 0.04
Pif1Q80SX8 Gm43514-201ENSMUST00000198852 424 ntBASIC15.3■□□□□ 0.04
Pif1Q80SX8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Pif1Q80SX8 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.3■□□□□ 0.04
Pif1Q80SX8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pif1Q80SX8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.29■□□□□ 0.04
Pif1Q80SX8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Gm13884-201ENSMUST00000118103 829 ntBASIC15.29■□□□□ 0.04
Pif1Q80SX8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pif1Q80SX8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.28■□□□□ 0.04
Pif1Q80SX8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.28■□□□□ 0.04
Pif1Q80SX8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pif1Q80SX8 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.27■□□□□ 0.04
Pif1Q80SX8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.27■□□□□ 0.04
Pif1Q80SX8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Gm11452-201ENSMUST00000122376 690 ntBASIC15.27■□□□□ 0.04
Pif1Q80SX8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pif1Q80SX8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pif1Q80SX8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pif1Q80SX8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pif1Q80SX8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pif1Q80SX8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms