Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Cspg5Q71M36 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Olfr129-201ENSMUST00000122318 993 ntBASIC17.2■□□□□ 0.34
Cspg5Q71M36 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Gm34391-201ENSMUST00000203706 907 ntBASIC17.2■□□□□ 0.34
Cspg5Q71M36 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cspg5Q71M36 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cspg5Q71M36 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Gm11452-201ENSMUST00000122376 690 ntBASIC17.19■□□□□ 0.34
Cspg5Q71M36 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cspg5Q71M36 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Actl10-202ENSMUST00000226583 1501 ntBASIC17.18■□□□□ 0.34
Cspg5Q71M36 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.18■□□□□ 0.34
Cspg5Q71M36 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.18■□□□□ 0.34
Cspg5Q71M36 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cspg5Q71M36 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.17■□□□□ 0.34
Cspg5Q71M36 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cspg5Q71M36 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cspg5Q71M36 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms