Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Scn10aQ6QIY3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn10aQ6QIY3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.77■□□□□ 0.6
Scn10aQ6QIY3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn10aQ6QIY3 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.77■□□□□ 0.6
Scn10aQ6QIY3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn10aQ6QIY3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn10aQ6QIY3 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.77■□□□□ 0.6
Scn10aQ6QIY3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn10aQ6QIY3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Scn10aQ6QIY3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn10aQ6QIY3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn10aQ6QIY3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.77■□□□□ 0.59
Scn10aQ6QIY3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn10aQ6QIY3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.77■□□□□ 0.59
Scn10aQ6QIY3 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.77■□□□□ 0.59
Scn10aQ6QIY3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Scn10aQ6QIY3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn10aQ6QIY3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Gm26308-201ENSMUST00000157768 69 ntBASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Scn10aQ6QIY3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.75■□□□□ 0.59
Scn10aQ6QIY3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Scn10aQ6QIY3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.73■□□□□ 0.59
Scn10aQ6QIY3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn10aQ6QIY3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms