Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Snrnp200Q6P4T2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Gm14859-201ENSMUST00000117752 357 ntBASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Snrnp200Q6P4T2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Gm27357-201ENSMUST00000183754 135 ntBASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Gm44430-201ENSMUST00000203376 995 ntBASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Snrnp200Q6P4T2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Gm29707-201ENSMUST00000196325 491 ntBASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Snrnp200Q6P4T2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.64■□□□□ 0.1
Snrnp200Q6P4T2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Gm9103-201ENSMUST00000119371 405 ntBASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.64■□□□□ 0.09
Snrnp200Q6P4T2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms